Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2346

Experiment: Ying_Others16 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 3
1,242,021	+				-1.1
1,242,021	+				+0.1
1,242,021	+				-0.5
1,242,022	-				-0.3
1,242,022	-				-0.3
1,242,156	+				+0.9
1,242,156	+				-0.1
1,242,156	+				-0.6
1,242,156	+				+0.3
1,242,156	+				-0.1
1,242,157	-				-0.0
1,242,157	-				+0.9
1,242,157	-				+1.1
1,242,220	+				+0.4
1,242,220	+				-0.1
1,242,220	+				+0.4
1,242,220	+				-0.7
1,242,221	-				-0.3
1,242,232	+				+0.8
1,242,279	+				-0.4
1,242,284	+				-0.1
1,242,284	+				+0.4
1,242,305	+				+0.6
1,242,305	+				+0.4
1,242,305	+				-0.5
1,242,306	-				-0.1
1,242,306	-				-0.7
1,242,428	+				-0.1
1,242,429	-				-0.7
1,242,429	-				+1.6
1,242,429	-				+0.9
1,242,429	-				-0.4
1,242,482	-				-0.3
1,242,515	+				+0.5
1,242,515	+				+0.5
1,242,515	+				+1.6
1,242,515	+				+0.3
1,242,515	+				+0.3
1,242,515	+				-0.8
1,242,515	+				+1.1
1,242,515	+				-2.4
1,242,515	+				-0.7
1,242,515	+				-0.7
1,242,516	-				-1.1
1,242,516	-				-0.7
1,242,516	-				+0.7
1,242,516	-				-0.0
1,242,540	-				+0.3
1,242,690	+				+0.1
1,242,691	-				+0.2
1,242,715	+				-0.1
1,242,715	+				+1.3
1,242,715	+				-0.6
1,242,715	+				-0.1
1,242,715	+				-0.1
1,242,715	+				-0.5
1,242,715	+				-0.7
1,242,716	-				-0.6
1,242,716	-				-0.5
1,242,716	-				+0.3
1,242,716	-				-0.4
1,242,716	-				-1.3
1,242,746	+				+0.2
1,242,809	+				+0.2
1,242,809	+				+1.3
1,242,810	-				+0.0
1,242,810	-				+0.1
1,242,810	-				+0.3
1,242,810	-				+0.2
1,242,957	+				-0.1
1,242,957	+				-0.2
1,242,958	-				-0.1
1,242,958	-				+0.1
1,242,958	-				+0.9
1,242,958	-				-0.4
1,242,959	+				-0.2
1,242,959	+				-0.7
1,242,959	+				+0.0
1,242,966	+				+0.2
1,242,967	-				-0.7
1,243,012	+		GFF2346	0.13	-0.9
1,243,012	+		GFF2346	0.13	-1.0
1,243,013	-		GFF2346	0.14	-0.1
1,243,108	-		GFF2346	0.84	-0.1
1,243,121	+				+0.9
1,243,219	+				+0.9
1,243,220	+				+0.1
1,243,220	+				+0.0
1,243,220	+				-0.2
1,243,221	-				+0.2
1,243,221	-				+0.3
1,243,221	-				+0.3
1,243,250	+				+0.9
1,243,250	+				+0.1
1,243,251	-				+0.9
1,243,290	+				-0.5
1,243,346	+				+0.0
1,243,347	-				+0.7
1,243,497	+				-0.3
1,243,497	+				+0.6
1,243,497	+				-0.4
1,243,498	-				-0.2
1,243,498	-				-1.3
1,243,507	-				-0.1
1,243,507	-				+0.3
1,243,540	-				-0.3
1,243,613	-				+0.1
1,243,613	-				-1.4
1,243,623	-				-0.2
1,243,623	-				+0.2
1,243,623	-				-0.5