Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2295

Experiment: Ying_Others16 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 3
1,179,757	+		GFF2293	0.83	-0.3
1,179,998	+		GFF2294	0.14	-0.3
1,180,166	+		GFF2294	0.36	-0.6
1,180,166	+		GFF2294	0.36	+0.8
1,180,499	+		GFF2294	0.79	+0.2
1,180,556	+		GFF2294	0.86	+1.3
1,180,557	-		GFF2294	0.87	-0.2
1,180,557	-		GFF2294	0.87	-0.6
1,181,580	+				+0.1
1,181,581	-				-0.3
1,181,624	+				-1.1
1,181,624	+				-0.6
1,181,728	-		GFF2296	0.15	+0.3
1,181,734	-		GFF2296	0.16	-0.2
1,181,787	+		GFF2296	0.23	-0.3
1,181,787	+		GFF2296	0.23	+0.9
1,181,788	-		GFF2296	0.23	+0.3
1,181,788	-		GFF2296	0.23	+0.3
1,181,788	-		GFF2296	0.23	-0.3
1,181,982	+		GFF2296	0.49	-0.4
1,182,009	+		GFF2296	0.53	+0.4
1,182,357	+				-0.3
1,182,365	+				+0.1
1,182,366	-				+0.1