Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2093

Experiment: Ying_Others16 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep B; time point 3
979,226	+		GFF2092	0.75	+0.0
979,226	+		GFF2092	0.75	-0.1
979,226	+		GFF2092	0.75	+0.4
979,227	-		GFF2092	0.75	+0.9
979,227	-		GFF2092	0.75	-0.2
979,229	+		GFF2092	0.75	-0.7
979,229	+		GFF2092	0.75	-0.2
979,419	-		GFF2092	0.80	-0.5
979,419	-		GFF2092	0.80	-0.1
979,419	-		GFF2092	0.80	-0.2
980,042	+				-1.1
980,410	-		GFF2093	0.26	-0.6
980,425	-		GFF2093	0.28	+1.1
980,446	-		GFF2093	0.30	-0.5
980,749	-		GFF2093	0.59	-0.1
980,749	-		GFF2093	0.59	-0.2
980,805	+		GFF2093	0.65	+1.4
980,805	+		GFF2093	0.65	+0.4
981,424	-		GFF2094	0.17	+0.5
981,424	-		GFF2094	0.17	-2.4
981,750	+		GFF2094	0.42	+0.2