Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF841

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
542,021	-		GFF840	0.54	+0.3
542,021	-		GFF840	0.54	+1.2
542,529	+		GFF840	0.88	+0.3
542,529	+		GFF840	0.88	-0.0
542,530	-		GFF840	0.88	-0.3
543,004	+		GFF841	0.30	+0.1
543,005	-		GFF841	0.30	-0.5
543,127	+		GFF841	0.50	-0.2
543,128	-		GFF841	0.50	-0.7
543,128	-		GFF841	0.50	-0.5
543,128	-		GFF841	0.50	+3.4
543,292	-		GFF841	0.77	+0.3
543,649	+				-0.3
543,649	+				+0.1
543,649	+				-1.4
543,649	+				-0.5
543,649	+				+0.3
543,650	-				-1.2
543,650	-				+0.2
543,698	-				-0.1
543,698	-				-1.1
543,698	-				+0.3
543,712	+				-0.1
543,712	+				-1.2
543,713	-				+0.4
543,778	+		GFF842	0.10	+0.3
543,779	-		GFF842	0.10	+0.8
544,006	+		GFF842	0.17	-1.7
544,036	-		GFF842	0.18	-0.9