Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5584

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
2,596,104	+		GFF5583	0.20	-1.1
2,596,105	-		GFF5583	0.20	-0.6
2,596,145	+		GFF5583	0.24	+0.3
2,596,145	+		GFF5583	0.24	-0.5
2,596,145	+		GFF5583	0.24	+0.4
2,596,146	-		GFF5583	0.24	+0.4
2,596,204	-		GFF5583	0.31	-0.3
2,596,236	-		GFF5583	0.34	+0.7
2,596,236	-		GFF5583	0.34	+0.0
2,596,277	+		GFF5583	0.39	-0.9
2,596,278	-		GFF5583	0.39	+3.1
2,596,278	-		GFF5583	0.39	-0.6
2,596,278	-		GFF5583	0.39	-0.1
2,596,442	+		GFF5583	0.57	-0.5
2,596,443	-		GFF5583	0.57	+0.0
2,596,532	+		GFF5583	0.67	+0.1
2,596,532	+		GFF5583	0.67	-0.6
2,596,532	+		GFF5583	0.67	-1.7
2,596,532	+		GFF5583	0.67	+0.9
2,596,532	+		GFF5583	0.67	-0.2
2,596,532	+		GFF5583	0.67	-0.4
2,596,607	+		GFF5583	0.75	-0.9
2,596,718	+		GFF5583	0.88	-0.4
2,596,885	+				+0.4
2,597,004	+				-0.1
2,597,350	-		GFF5584	0.12	-4.1
2,597,350	-		GFF5584	0.12	-2.5
2,597,350	-		GFF5584	0.12	-4.1
2,597,350	-		GFF5584	0.12	-1.4
2,597,350	-		GFF5584	0.12	-0.9
2,597,388	+		GFF5584	0.14	-3.5
2,597,389	-		GFF5584	0.14	+0.1
2,597,418	+		GFF5584	0.15	-1.7
2,597,493	+		GFF5584	0.18	-2.9
2,597,814	+		GFF5584	0.29	-3.0
2,597,872	-		GFF5584	0.31	-3.4
2,598,211	-		GFF5584	0.43	-6.2
2,598,369	+		GFF5584	0.49	-2.2
2,598,781	+		GFF5584	0.64	-2.7
2,598,781	+		GFF5584	0.64	-2.1
2,598,782	-		GFF5584	0.64	-1.1
2,598,782	-		GFF5584	0.64	+0.4
2,598,967	-		GFF5584	0.70	-3.7
2,599,906	-				+2.2