Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5424

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
2,424,738	-		GFF5422	0.90	-0.8
2,425,634	+		GFF5424	0.32	-0.8
2,425,739	+		GFF5424	0.38	-0.5
2,425,739	+		GFF5424	0.38	-0.3
2,426,238	-		GFF5424	0.65	-1.5
2,426,238	-		GFF5424	0.65	-0.4
2,426,367	-		GFF5424	0.72	-0.5
2,426,379	-		GFF5424	0.72	-0.2
2,426,594	+		GFF5424	0.84	-0.1
2,427,148	-		GFF5425	0.39	+0.1
2,427,255	+		GFF5425	0.55	-0.2
2,427,256	-		GFF5425	0.55	+0.9
2,427,256	-		GFF5425	0.55	+0.3
2,427,801	+				-0.2
2,427,802	-				-0.0
2,427,802	-				+0.6
2,427,810	+				+0.5