Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4785

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
1,793,777	+		GFF4784	0.24	+0.4
1,793,783	+		GFF4784	0.25	+0.2
1,793,784	-		GFF4784	0.25	+1.1
1,794,511	+		GFF4785	0.10	+4.4
1,794,511	+		GFF4785	0.10	+4.3
1,794,512	-		GFF4785	0.10	+4.3
1,794,512	-		GFF4785	0.10	+3.8
1,794,664	+		GFF4785	0.17	+4.1
1,794,664	+		GFF4785	0.17	+3.9
1,794,664	+		GFF4785	0.17	+4.3
1,794,730	+		GFF4785	0.21	+4.4
1,794,731	-		GFF4785	0.21	+4.9
1,794,802	+		GFF4785	0.24	+4.1
1,794,802	+		GFF4785	0.24	+4.0
1,794,802	+		GFF4785	0.24	+4.2
1,794,803	-		GFF4785	0.24	+4.3
1,794,803	-		GFF4785	0.24	+4.8
1,794,803	-		GFF4785	0.24	+4.5
1,794,841	+		GFF4785	0.26	+4.6
1,794,842	-		GFF4785	0.26	+4.2
1,794,992	-		GFF4785	0.33	+3.5
1,795,180	+		GFF4785	0.43	+4.5
1,795,180	+		GFF4785	0.43	+4.1
1,795,181	-		GFF4785	0.43	+4.3
1,795,181	-		GFF4785	0.43	+4.2
1,795,181	-		GFF4785	0.43	+4.3
1,795,181	-		GFF4785	0.43	+3.6
1,795,181	-		GFF4785	0.43	+4.1
1,795,181	-		GFF4785	0.43	+4.1
1,795,501	+		GFF4785	0.58	+4.2
1,795,502	-		GFF4785	0.58	+4.2
1,795,502	-		GFF4785	0.58	+4.3
1,795,502	-		GFF4785	0.58	+3.5
1,795,552	+		GFF4785	0.61	+3.3
1,795,552	+		GFF4785	0.61	+4.2
1,795,687	+		GFF4785	0.67	+3.9
1,795,688	-		GFF4785	0.67	+4.3
1,796,176	+				+4.5
1,796,176	+				+4.0
1,796,177	-				+4.1
1,796,177	-				+4.4
1,796,177	-				+4.7
1,796,177	-				+4.1
1,796,260	+				+4.5
1,796,348	+				+4.7
1,796,348	+				+4.4
1,796,348	+				+5.0
1,796,537	+		GFF4786	0.11	+4.1
1,796,537	+		GFF4786	0.11	+4.5
1,796,538	-		GFF4786	0.11	+4.3
1,796,538	-		GFF4786	0.11	+3.9
1,796,538	-		GFF4786	0.11	+5.0
1,796,703	-		GFF4786	0.21	+5.0
1,796,751	-		GFF4786	0.25	+4.4
1,796,757	-		GFF4786	0.25	+4.2
1,796,792	+		GFF4786	0.27	+4.4
1,796,793	-		GFF4786	0.27	+4.6
1,797,000	-		GFF4786	0.41	+4.5
1,797,065	+		GFF4786	0.45	+4.4
1,797,065	+		GFF4786	0.45	+4.3
1,797,066	-		GFF4786	0.45	+4.8
1,797,176	+		GFF4786	0.52	+3.6
1,797,176	+		GFF4786	0.52	+4.2
1,797,176	+		GFF4786	0.52	+4.6
1,797,176	+		GFF4786	0.52	+4.0
1,797,176	+		GFF4786	0.52	+4.3
1,797,176	+		GFF4786	0.52	+4.6
1,797,176	+		GFF4786	0.52	+4.3
1,797,176	+		GFF4786	0.52	+4.2
1,797,177	-		GFF4786	0.52	+4.4
1,797,177	-		GFF4786	0.52	+4.2
1,797,177	-		GFF4786	0.52	+4.7
1,797,182	+		GFF4786	0.53	+4.9
1,797,183	-		GFF4786	0.53	+3.9
1,797,341	+		GFF4786	0.63	+4.4
1,797,341	+		GFF4786	0.63	+5.1
1,797,341	+		GFF4786	0.63	+4.3
1,797,341	+		GFF4786	0.63	+4.5
1,797,342	-		GFF4786	0.63	+4.0
1,797,342	-		GFF4786	0.63	+3.9
1,797,342	-		GFF4786	0.63	+3.4
1,797,342	-		GFF4786	0.63	+4.5
1,797,342	-		GFF4786	0.63	+4.1
1,797,342	-		GFF4786	0.63	+5.4
1,797,342	-		GFF4786	0.63	+4.2