Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3660

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
543,836	+		GFF3659	0.37	-0.0
544,609	-				+0.8
544,961	+		GFF3660	0.49	+0.7
545,042	+		GFF3660	0.61	+0.5
545,042	+		GFF3660	0.61	-0.5
545,043	-		GFF3660	0.61	+2.3
545,043	-		GFF3660	0.61	-0.5
545,043	-		GFF3660	0.61	-0.1
545,604	+		GFF3661	0.31	-0.2
545,604	+		GFF3661	0.31	+0.3
545,605	-		GFF3661	0.32	-0.4
546,247	+		GFF3662	0.13	+0.0
546,248	-		GFF3662	0.13	+0.7