Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3179

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
58,481	-		GFF3178	0.69	+0.2
58,573	+				+0.1
58,792	+				+1.6
58,839	+				-0.5
58,839	+				-1.2
58,898	+				+0.7
58,982	+				+0.3
58,983	-				-0.0
58,983	-				+0.1
59,087	-				-0.3
59,149	+				-0.5
59,452	+				+0.9
59,869	-		GFF3179	0.51	+0.7
59,893	+		GFF3179	0.54	-0.6
59,893	+		GFF3179	0.54	-0.4
60,103	+		GFF3179	0.77	-0.2
60,474	+				-0.0
60,474	+				-0.1
60,475	-				-0.4
60,552	+				+1.6
60,553	-				-0.6
60,831	+				+0.5
60,831	+				-0.3
60,832	-				-0.5
60,832	-				-1.1
60,891	+		GFF3180	0.13	-0.5