Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2852

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
440,043	+		GFF2851	0.34	+0.1
440,043	+		GFF2851	0.34	+0.8
440,043	+		GFF2851	0.34	+0.2
440,043	+		GFF2851	0.34	-0.1
440,043	+		GFF2851	0.34	+0.7
440,043	+		GFF2851	0.34	-0.5
440,044	-		GFF2851	0.34	-0.1
440,103	+		GFF2851	0.38	+0.0
440,173	-		GFF2851	0.43	+0.3
440,628	+		GFF2851	0.77	-0.1
440,628	+		GFF2851	0.77	-0.2
440,628	+		GFF2851	0.77	+0.5
441,376	+		GFF2853	0.15	+0.2
441,376	+		GFF2853	0.15	-1.5
441,376	+		GFF2853	0.15	+0.1
441,376	+		GFF2853	0.15	+0.5
441,376	+		GFF2853	0.15	-0.7
441,376	+		GFF2853	0.15	+0.3
441,376	+		GFF2853	0.15	+1.0
441,376	+		GFF2853	0.15	+0.3
441,376	+		GFF2853	0.15	+0.7
441,376	+		GFF2853	0.15	-0.5
441,376	+		GFF2853	0.15	-0.2
441,377	-		GFF2853	0.15	-1.4
441,377	-		GFF2853	0.15	-0.3
441,377	-		GFF2853	0.15	+0.5
441,377	-		GFF2853	0.15	+0.1
441,377	-		GFF2853	0.15	+0.1
441,425	-		GFF2853	0.18	+0.8
441,466	+		GFF2853	0.20	+0.3