Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2264

Experiment: Ying_Others16 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep A; time point 3
1,150,219	+		GFF2263	0.82	-0.1
1,150,220	-		GFF2263	0.82	-0.1
1,150,220	-		GFF2263	0.82	-0.1
1,150,249	+		GFF2263	0.83	+0.7
1,150,249	+		GFF2263	0.83	-1.0
1,150,249	+		GFF2263	0.83	-0.2
1,150,249	+		GFF2263	0.83	-0.3
1,150,250	-		GFF2263	0.83	-0.3
1,150,319	+		GFF2263	0.85	-0.3
1,150,319	+		GFF2263	0.85	-0.8
1,150,319	+		GFF2263	0.85	+0.4
1,150,319	+		GFF2263	0.85	+1.0
1,150,320	-		GFF2263	0.85	+0.4
1,150,320	-		GFF2263	0.85	-0.2
1,150,325	+		GFF2263	0.85	-0.8
1,150,325	+		GFF2263	0.85	+0.1
1,150,326	-		GFF2263	0.85	-0.1
1,150,326	-		GFF2263	0.85	+0.6
1,150,326	-		GFF2263	0.85	-0.4
1,150,351	+		GFF2263	0.86	+0.5
1,150,351	+		GFF2263	0.86	-0.2
1,150,351	+		GFF2263	0.86	+0.3
1,150,351	+		GFF2263	0.86	+0.4
1,150,351	+		GFF2263	0.86	-0.3
1,150,351	+		GFF2263	0.86	+0.3
1,150,351	+		GFF2263	0.86	-0.1
1,150,351	+		GFF2263	0.86	-0.7
1,150,352	-		GFF2263	0.86	+1.0
1,150,352	-		GFF2263	0.86	+0.1
1,150,352	-		GFF2263	0.86	-0.5
1,150,352	-		GFF2263	0.86	+0.3
1,150,352	-		GFF2263	0.86	-0.1
1,150,352	-		GFF2263	0.86	+0.7
1,150,381	+		GFF2263	0.87	+0.2
1,150,381	+		GFF2263	0.87	+0.2
1,150,488	+				+1.0
1,150,488	+				-0.3
1,150,488	+				+0.5
1,150,488	+				-0.2
1,150,488	+				-0.5
1,150,488	+				-0.3
1,150,489	-				-0.1
1,150,489	-				+0.2
1,150,489	-				-0.9
1,150,489	-				-1.0
1,150,495	+				+1.0
1,150,495	+				-1.5
1,150,495	+				+0.5
1,150,495	+				+0.5
1,150,495	+				-1.3
1,150,495	+				-0.3
1,150,495	+				+1.5
1,150,495	+				-0.7
1,150,495	+				-0.4
1,150,495	+				+0.3
1,150,495	+				-0.0
1,150,495	+				-0.1
1,150,495	+				-1.3
1,150,496	-				-0.3
1,150,496	-				+0.3
1,150,496	-				-0.1
1,150,496	-				+0.4
1,150,496	-				+0.4
1,150,496	-				+3.1
1,150,496	-				+0.1
1,150,496	-				+0.0
1,150,496	-				+0.1
1,150,496	-				+0.2
1,150,496	-				-0.7
1,150,499	+				+0.0
1,150,499	+				-0.5
1,150,499	+				-0.4
1,150,499	+				+0.2
1,150,499	+				-0.2
1,150,499	+				+0.3
1,150,499	+				+1.5
1,150,500	-				-0.4
1,150,500	-				-0.1
1,150,500	-				+0.0
1,150,500	-				+0.5
1,150,500	-				+0.2
1,150,534	+				+0.3
1,150,564	+				+0.0
1,150,564	+				-0.0
1,150,564	+				-1.8
1,150,564	+				+0.1
1,150,564	+				-0.1
1,150,565	-				-0.4
1,150,565	-				-0.2
1,150,565	-				-0.4
1,150,565	-				-0.7
1,150,582	+				+0.2
1,150,582	+				-0.1
1,150,582	+				+1.2
1,150,582	+				+0.0
1,150,583	-				+0.5
1,150,631	-				-0.2
1,150,697	-				+0.5
1,150,724	+				-0.4
1,150,724	+				+0.9
1,150,724	+				-0.7
1,150,725	-				+0.8
1,150,739	+				+1.8
1,150,739	+				-1.3
1,150,740	-				-0.6
1,150,740	-				-0.4
1,150,740	-				-0.2
1,150,740	-				-0.1
1,150,740	-				-0.1
1,150,803	-				-1.0
1,150,845	+				+0.0
1,150,845	+				+0.0
1,150,845	+				-1.1
1,150,846	-				-0.7
1,150,856	+				-0.3
1,150,856	+				+0.5
1,150,856	+				+0.7
1,150,856	+				-0.7
1,150,857	-				-2.0
1,150,857	-				+0.8
1,150,866	+				-0.5
1,150,866	+				-0.5
1,150,866	+				-0.3
1,150,866	+				+4.0
1,150,866	+				+0.3
1,150,866	+				+0.5
1,150,866	+				+0.3
1,150,866	+				+0.6
1,150,866	+				-0.1
1,150,867	-				+0.0
1,150,867	-				-0.4
1,150,867	-				+1.0
1,150,867	-				+0.0
1,150,867	-				-0.1
1,151,037	+		GFF2264	0.31	-0.1
1,151,037	+		GFF2264	0.31	+1.0
1,151,037	+		GFF2264	0.31	+0.2
1,151,037	+		GFF2264	0.31	+1.0
1,151,037	+		GFF2264	0.31	+0.5
1,151,037	+		GFF2264	0.31	-0.4
1,151,037	+		GFF2264	0.31	-0.3
1,151,038	-		GFF2264	0.31	-0.2
1,151,038	-		GFF2264	0.31	+0.9
1,151,038	-		GFF2264	0.31	+0.0
1,151,038	-		GFF2264	0.31	+0.4
1,151,038	-		GFF2264	0.31	+0.3
1,151,038	-		GFF2264	0.31	+0.6
1,151,106	+		GFF2264	0.68	+0.5
1,151,107	-		GFF2264	0.68	-1.0
1,151,159	+				-1.1
1,151,159	+				-0.3
1,151,159	+				-0.3
1,151,159	+				-0.3
1,151,159	+				-0.5
1,151,159	+				-0.7
1,151,159	+				-0.3
1,151,159	+				+0.8
1,151,159	+				+0.0
1,151,159	+				+0.6
1,151,159	+				-0.2
1,151,159	+				-0.0
1,151,160	-				-1.8
1,151,160	-				-1.1
1,151,160	-				+0.0
1,151,160	-				+0.2
1,151,597	+		GFF2265	0.67	+0.0
1,151,597	+		GFF2265	0.67	+0.7
1,151,598	-		GFF2265	0.67	+0.3
1,151,855	+				-0.3
1,151,909	+				-0.2
1,151,909	+				-0.3
1,151,909	+				-0.4
1,151,909	+				-0.5
1,151,910	-				-0.8
1,151,910	-				+0.5
1,151,910	-				-0.4
1,151,910	-				-0.4
1,152,020	+		GFF2266	0.33	-0.7
1,152,020	+		GFF2266	0.33	-1.5
1,152,021	-		GFF2266	0.33	+0.2