Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5397

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
2,400,922	-		GFF5396	0.28	+0.3
2,401,143	+		GFF5396	0.53	+0.9
2,401,144	-		GFF5396	0.54	-0.6
2,401,186	-		GFF5396	0.58	-1.9
2,401,644	-		GFF5397	0.17	-1.9
2,401,688	+		GFF5397	0.26	-0.2
2,401,689	-		GFF5397	0.27	-0.2
2,402,304	+				+0.7
2,402,330	+				+2.8
2,402,567	+				+0.2
2,402,567	+				-1.1
2,402,687	+		GFF5398	0.12	+0.3
2,402,901	-		GFF5398	0.22	+0.9
2,402,901	-		GFF5398	0.22	+0.1
2,403,002	+		GFF5398	0.27	+0.5