Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5290

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
2,302,943	-				-0.1
2,303,579	-				+0.1
2,304,090	+		GFF5290	0.59	-0.3
2,304,090	+		GFF5290	0.59	-0.6
2,304,275	-		GFF5290	0.80	-0.7
2,304,464	+				-0.2
2,304,464	+				+0.1
2,304,465	-				-1.3
2,304,465	-				+0.2
2,305,060	+		GFF5292	0.34	+0.1
2,305,061	-		GFF5292	0.34	+0.4
2,305,061	-		GFF5292	0.34	+1.5
2,305,061	-		GFF5292	0.34	+0.6
2,305,166	-		GFF5292	0.51	-0.3
2,305,166	-		GFF5292	0.51	-0.1
2,305,222	+		GFF5292	0.60	-0.0
2,305,223	-		GFF5292	0.60	+0.1
2,305,252	+		GFF5292	0.65	+0.1
2,305,351	+		GFF5292	0.81	+0.4
2,305,351	+		GFF5292	0.81	+0.2