Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4709

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
1,661,210	-		GFF4708	0.22	-1.7
1,661,417	-		GFF4708	0.43	-0.6
1,661,417	-		GFF4708	0.43	-1.3
1,661,467	+		GFF4708	0.48	+0.2
1,661,581	+		GFF4708	0.60	-0.1
1,661,581	+		GFF4708	0.60	+0.0
1,661,582	-		GFF4708	0.60	+0.1
1,661,582	-		GFF4708	0.60	-0.1
1,661,984	+				+0.1
1,662,087	-				+0.6
1,662,092	+				-0.1
1,662,093	-				+0.1
1,662,093	-				-1.3
1,662,462	-		GFF4709	0.34	-0.6
1,663,305	-				+0.7
1,663,305	-				-0.6
1,663,424	+				+0.0
1,663,424	+				+0.9
1,663,424	+				-0.4
1,663,425	-				+0.9
1,663,425	-				+0.9
1,663,425	-				-0.5
1,663,469	+				-0.1
1,663,469	+				-0.1
1,663,470	-				+1.4
1,663,962	+		GFF4710	0.43	+0.1