Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4694

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
1,643,618	+		GFF4692	0.77	-0.8
1,643,618	+		GFF4692	0.77	+0.7
1,643,618	+		GFF4692	0.77	-0.8
1,643,618	+		GFF4692	0.77	-1.7
1,643,618	+		GFF4692	0.77	-1.1
1,643,618	+		GFF4692	0.77	-0.7
1,643,618	+		GFF4692	0.77	+0.5
1,643,619	-		GFF4692	0.77	-1.7
1,643,619	-		GFF4692	0.77	-1.8
1,643,696	+		GFF4692	0.89	-0.7
1,643,696	+		GFF4692	0.89	-0.6
1,643,696	+		GFF4692	0.89	-1.8
1,643,697	-		GFF4692	0.89	-0.1
1,643,829	+				-0.7
1,643,829	+				-1.1
1,643,829	+				-0.3
1,643,829	+				-2.1
1,643,829	+				-1.6
1,643,830	-				-1.4
1,643,830	-				-1.1
1,643,959	-		GFF4693	0.24	-0.9
1,643,964	+		GFF4693	0.25	-2.3
1,643,964	+		GFF4693	0.25	+0.1
1,643,964	+		GFF4693	0.25	-1.0
1,643,964	+		GFF4693	0.25	-0.1
1,643,964	+		GFF4693	0.25	-1.1
1,643,965	-		GFF4693	0.25	-0.7
1,644,001	-		GFF4693	0.30	-0.9
1,644,001	-		GFF4693	0.30	-1.3
1,644,001	-		GFF4693	0.30	-0.5
1,644,001	-		GFF4693	0.30	-2.0
1,644,009	+		GFF4693	0.31	-1.9
1,644,009	+		GFF4693	0.31	-1.3
1,644,010	-		GFF4693	0.31	+0.4
1,644,012	+		GFF4693	0.32	-0.5
1,644,012	+		GFF4693	0.32	-2.2
1,644,012	+		GFF4693	0.32	-1.7
1,644,013	-		GFF4693	0.32	-1.1
1,644,013	-		GFF4693	0.32	-1.1
1,644,129	+		GFF4693	0.48	-1.0
1,644,130	-		GFF4693	0.48	-0.1
1,644,271	-		GFF4693	0.68	-0.6
1,644,271	-		GFF4693	0.68	-1.6
1,644,372	+		GFF4693	0.82	-0.9
1,644,373	-		GFF4693	0.82	+1.4
1,644,375	+		GFF4693	0.82	-2.1
1,644,375	+		GFF4693	0.82	-2.3
1,644,375	+		GFF4693	0.82	-1.0
1,644,375	+		GFF4693	0.82	-0.8
1,644,375	+		GFF4693	0.82	-0.7
1,644,376	-		GFF4693	0.82	-1.0
1,644,376	-		GFF4693	0.82	-1.0
1,644,393	+		GFF4693	0.85	+0.9
1,644,393	+		GFF4693	0.85	-0.5
1,644,393	+		GFF4693	0.85	-1.1
1,644,394	-		GFF4693	0.85	-1.5
1,644,394	-		GFF4693	0.85	-1.5
1,644,394	-		GFF4693	0.85	-0.7
1,644,394	-		GFF4693	0.85	-0.5
1,644,394	-		GFF4693	0.85	-1.2
1,644,394	-		GFF4693	0.85	-1.9
1,644,414	+		GFF4693	0.88	-1.6
1,644,414	+		GFF4693	0.88	-1.4
1,644,414	+		GFF4693	0.88	-0.2
1,644,540	+				-0.7
1,644,624	+				-1.5
1,644,624	+				-0.3
1,644,625	-				-0.9
1,644,625	-				-1.5
1,644,625	-				-1.2
1,644,625	-				-0.8
1,644,625	-				-1.0
1,644,625	-				-0.6
1,645,059	+		GFF4694	0.47	-0.7
1,645,060	-		GFF4694	0.47	-1.4
1,645,060	-		GFF4694	0.47	-0.8
1,645,569	+				+0.5
1,645,570	-				+0.0
1,645,590	+				-0.1
1,645,590	+				-0.0
1,645,591	-				-0.9
1,645,591	-				-0.7
1,645,591	-				-2.7
1,646,165	+		GFF4695	0.59	-0.5
1,646,492	+				-0.7
1,646,492	+				-0.3
1,646,492	+				-0.7
1,646,492	+				-0.5
1,646,493	-				-0.4
1,646,493	-				+0.0
1,646,493	-				-0.1
1,646,571	+				+0.9
1,646,572	-				-0.3