Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4471

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
1,396,597	+		GFF4468	0.89	+0.1
1,396,598	-		GFF4468	0.89	-0.1
1,396,942	-		GFF4469	0.17	-0.7
1,397,334	-				+0.6
1,397,338	+				+0.2
1,397,339	-				+0.6
1,397,339	-				-0.3
1,397,421	+				+0.1
1,397,422	-				+0.9
1,397,847	+		GFF4471	0.22	-1.5
1,398,667	-		GFF4471	0.69	+1.3
1,398,879	+		GFF4471	0.81	+0.2
1,398,885	+		GFF4471	0.82	-0.3
1,398,886	-		GFF4471	0.82	-0.2
1,399,213	+				-0.3
1,399,246	+				-0.1