Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4455

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
1,382,943	+		GFF4454	0.51	+0.6
1,382,943	+		GFF4454	0.51	-0.1
1,382,943	+		GFF4454	0.51	+0.9
1,382,943	+		GFF4454	0.51	+1.3
1,382,943	+		GFF4454	0.51	-0.1
1,382,943	+		GFF4454	0.51	-0.3
1,382,944	-		GFF4454	0.51	+0.1
1,382,944	-		GFF4454	0.51	-0.1
1,383,150	+		GFF4454	0.71	+0.5
1,383,285	+		GFF4454	0.84	+0.5
1,383,496	+				+0.2
1,383,910	+		GFF4455	0.30	-0.0
1,383,910	+		GFF4455	0.30	+0.1
1,383,911	-		GFF4455	0.30	-0.4
1,383,991	+		GFF4455	0.39	+0.9
1,383,992	-		GFF4455	0.39	-0.1
1,384,034	-		GFF4455	0.44	+0.2
1,385,374	-		GFF4456	0.52	+0.8