Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4211

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
1,122,503	+		GFF4210	0.15	+1.4
1,122,503	+		GFF4210	0.15	-0.5
1,122,503	+		GFF4210	0.15	+0.0
1,122,503	+		GFF4210	0.15	-0.9
1,122,503	+		GFF4210	0.15	+0.2
1,122,503	+		GFF4210	0.15	+0.2
1,122,504	-		GFF4210	0.15	+0.3
1,122,504	-		GFF4210	0.15	-0.7
1,122,504	-		GFF4210	0.15	+0.7
1,122,504	-		GFF4210	0.15	-0.4
1,122,504	-		GFF4210	0.15	+0.2
1,122,504	-		GFF4210	0.15	-0.1
1,122,504	-		GFF4210	0.15	+1.2
1,122,504	-		GFF4210	0.15	-0.7
1,122,504	-		GFF4210	0.15	+1.0
1,122,507	-		GFF4210	0.16	+0.7
1,122,507	-		GFF4210	0.16	+0.7
1,122,507	-		GFF4210	0.16	-0.2
1,122,560	+		GFF4210	0.20	-0.3
1,122,560	+		GFF4210	0.20	-0.3
1,122,561	-		GFF4210	0.21	-0.7
1,122,561	-		GFF4210	0.21	-0.1
1,122,561	-		GFF4210	0.21	+0.1
1,122,561	-		GFF4210	0.21	-0.7
1,122,561	-		GFF4210	0.21	+0.2
1,122,561	-		GFF4210	0.21	+0.2
1,122,561	-		GFF4210	0.21	+0.3
1,122,561	-		GFF4210	0.21	-0.1
1,122,566	+		GFF4210	0.21	+0.5
1,122,566	+		GFF4210	0.21	+0.4
1,122,566	+		GFF4210	0.21	-0.1
1,122,567	-		GFF4210	0.21	-0.6
1,122,567	-		GFF4210	0.21	-0.2
1,122,567	-		GFF4210	0.21	+0.4
1,123,028	+		GFF4210	0.62	+1.5
1,123,028	+		GFF4210	0.62	-0.4
1,123,028	+		GFF4210	0.62	+0.9
1,123,028	+		GFF4210	0.62	+0.1
1,123,028	+		GFF4210	0.62	+1.4
1,123,028	+		GFF4210	0.62	-0.7
1,123,029	-		GFF4210	0.62	+0.2
1,123,070	+		GFF4210	0.66	+0.1
1,123,070	+		GFF4210	0.66	+0.4
1,123,071	-		GFF4210	0.66	+0.1
1,123,220	+		GFF4210	0.80	+2.5
1,123,220	+		GFF4210	0.80	+0.2
1,123,221	-		GFF4210	0.80	+0.5
1,123,221	-		GFF4210	0.80	+0.8
1,123,239	-		GFF4210	0.81	+0.1
1,123,239	-		GFF4210	0.81	-0.1
1,123,278	-		GFF4210	0.85	+0.5
1,123,515	+				-2.9
1,123,515	+				-5.0
1,123,530	+				-0.1
1,123,531	-				-2.7
1,124,007	+		GFF4211	0.51	-3.5
1,124,007	+		GFF4211	0.51	-1.4
1,124,007	+		GFF4211	0.51	-3.2
1,124,007	+		GFF4211	0.51	-3.7
1,124,008	-		GFF4211	0.51	-4.5
1,124,008	-		GFF4211	0.51	-1.1
1,124,008	-		GFF4211	0.51	-1.4
1,124,022	+		GFF4211	0.53	-2.1
1,124,022	+		GFF4211	0.53	-1.1
1,124,022	+		GFF4211	0.53	-3.1
1,124,023	-		GFF4211	0.53	-1.7
1,124,023	-		GFF4211	0.53	-2.6
1,124,046	+		GFF4211	0.55	-2.7
1,124,047	-		GFF4211	0.55	-4.1
1,124,047	-		GFF4211	0.55	-3.0
1,124,047	-		GFF4211	0.55	-1.4
1,124,418	+		GFF4211	0.89	-1.9
1,124,418	+		GFF4211	0.89	-4.2
1,124,419	-		GFF4211	0.89	-2.6
1,124,544	+				-1.9
1,124,545	-				+0.1
1,124,545	-				-0.1
1,125,437	+		GFF4213	0.24	+1.5
1,125,437	+		GFF4213	0.24	+0.2
1,125,468	-		GFF4213	0.28	-0.6
1,125,510	-		GFF4213	0.35	+0.3