Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4112

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
1,024,057	+				-1.3
1,024,058	-				-0.1
1,024,105	-				-0.7
1,024,108	-				+0.0
1,024,108	-				+0.3
1,024,780	-		GFF4112	0.71	-0.3
1,024,780	-		GFF4112	0.71	+0.2
1,024,917	+		GFF4112	0.86	+1.3
1,025,049	+				+0.3
1,025,049	+				+0.1
1,025,049	+				+0.0
1,025,049	+				+0.2
1,025,049	+				+0.2
1,025,049	+				-0.1
1,025,049	+				+0.1
1,025,049	+				+0.2
1,025,050	-				+0.6
1,025,050	-				-0.1
1,025,868	+				+0.3
1,025,868	+				+0.2
1,025,869	-				-0.5