Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3902

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
813,298	+				+0.0
813,398	-		GFF3902	0.13	+0.0
813,487	+		GFF3902	0.17	-0.0
813,487	+		GFF3902	0.17	+0.3
813,488	-		GFF3902	0.17	+0.4
813,488	-		GFF3902	0.17	+0.4
813,488	-		GFF3902	0.17	+0.2
813,542	-		GFF3902	0.20	-1.1
814,471	+		GFF3902	0.66	+0.4
814,471	+		GFF3902	0.66	+0.5
814,472	-		GFF3902	0.66	+1.1
814,472	-		GFF3902	0.66	+0.0
815,090	-				+0.2
815,562	+		GFF3903	0.29	-0.2
815,562	+		GFF3903	0.29	-0.4
815,562	+		GFF3903	0.29	+0.5
815,562	+		GFF3903	0.29	-0.1
815,563	-		GFF3903	0.29	+0.4
815,634	+		GFF3903	0.34	-0.0
815,635	-		GFF3903	0.34	+0.5
815,635	-		GFF3903	0.34	-0.5
815,685	+		GFF3903	0.37	-0.2
815,685	+		GFF3903	0.37	-0.0
815,686	-		GFF3903	0.38	+0.0
815,686	-		GFF3903	0.38	-0.5
815,926	-		GFF3903	0.55	-0.1