Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3364

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
248,417	+		GFF3363	0.44	-1.2
248,474	+		GFF3363	0.48	-0.6
248,475	-		GFF3363	0.48	-0.9
248,603	+		GFF3363	0.57	-1.9
248,603	+		GFF3363	0.57	-2.7
248,603	+		GFF3363	0.57	-1.4
248,805	-		GFF3363	0.71	-1.1
249,089	+				-1.5
249,089	+				-2.3
249,089	+				-1.9
249,090	-				-1.1
249,090	-				-1.0
249,090	-				-1.8
249,090	-				-2.5
249,090	-				-1.4
249,090	-				-1.1
249,134	+				-1.6
249,134	+				+0.9
249,135	-				+0.3
249,162	+				-1.5
249,162	+				-0.7
249,163	-				-1.2
249,194	+				-2.1
249,194	+				-1.6
249,194	+				-0.5
249,195	-				-2.7
249,195	-				-1.7
249,195	-				-1.4
249,195	-				-1.8
249,884	-		GFF3364	0.69	-0.5
249,884	-		GFF3364	0.69	+0.6