Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2973

Experiment: Ying_AminoAcid20 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep C; time point 3
50,940	-		GFF2972	0.45	+0.4
50,940	-		GFF2972	0.45	-0.6
50,940	-		GFF2972	0.45	+0.4
51,227	+		GFF2972	0.68	+0.4
51,227	+		GFF2972	0.68	+0.5
51,228	-		GFF2972	0.68	+0.1
51,228	-		GFF2972	0.68	+0.2
51,753	-		GFF2973	0.20	+1.3
52,219	+				-1.8
52,439	-		GFF2974	0.29	+1.0
52,439	-		GFF2974	0.29	+1.0
52,463	-		GFF2974	0.31	+0.4
52,477	+		GFF2974	0.32	-0.6
52,478	-		GFF2974	0.33	+0.7