Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5615

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,632,053	-		GFF5613	0.85	+0.3
2,632,610	+		GFF5614	0.48	+1.4
2,632,610	+		GFF5614	0.48	-0.6
2,632,611	-		GFF5614	0.49	-1.9
2,633,057	-				+0.1
2,633,057	-				+1.0
2,633,503	+		GFF5615	0.84	-0.9
2,634,141	-		GFF5616	0.47	-1.6
2,634,221	+		GFF5616	0.54	+0.7
2,634,221	+		GFF5616	0.54	+0.2
2,634,222	-		GFF5616	0.54	-0.3
2,634,222	-		GFF5616	0.54	-0.6
2,634,350	+		GFF5616	0.65	-0.1
2,634,350	+		GFF5616	0.65	-2.2
2,634,351	-		GFF5616	0.65	-0.8
2,634,351	-		GFF5616	0.65	-0.0
2,634,416	+		GFF5616	0.70	-0.2