Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5421

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,422,398	-		GFF5420	0.53	-0.2
2,422,523	+		GFF5420	0.66	+0.2
2,422,523	+		GFF5420	0.66	-0.4
2,422,523	+		GFF5420	0.66	+0.1
2,422,524	-		GFF5420	0.66	+0.0
2,422,524	-		GFF5420	0.66	-0.3
2,422,649	+		GFF5420	0.79	-0.3
2,422,649	+		GFF5420	0.79	-0.0
2,422,649	+		GFF5420	0.79	+0.7
2,422,743	-		GFF5420	0.89	+0.3
2,422,772	+				-0.0
2,422,772	+				+0.4
2,422,772	+				+0.3
2,422,772	+				+1.0
2,422,772	+				-0.0
2,422,772	+				-0.2
2,423,835	-		GFF5421	0.75	-0.8
2,424,738	-		GFF5422	0.90	-0.4