Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF515

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
181,924	+		GFF514	0.11	+0.6
181,976	-		GFF514	0.17	-0.8
181,976	-		GFF514	0.17	-0.1
181,976	-		GFF514	0.17	-0.2
182,014	+		GFF514	0.21	-0.4
182,014	+		GFF514	0.21	+0.4
182,059	+		GFF514	0.25	-1.5
182,059	+		GFF514	0.25	-0.1
182,059	+		GFF514	0.25	-0.7
182,059	+		GFF514	0.25	+0.1
182,059	+		GFF514	0.25	-0.2
182,059	+		GFF514	0.25	+1.7
182,060	-		GFF514	0.25	-0.0
182,060	-		GFF514	0.25	+0.1
182,060	-		GFF514	0.25	+0.4
182,060	-		GFF514	0.25	-1.7
182,060	-		GFF514	0.25	+0.2
182,140	+		GFF514	0.34	-0.1
182,140	+		GFF514	0.34	+0.4
182,141	-		GFF514	0.34	-0.6
182,141	-		GFF514	0.34	+0.2
182,562	+		GFF514	0.77	+0.0
182,639	-		GFF514	0.85	+0.3
182,651	+		GFF514	0.87	+0.8
182,652	-		GFF514	0.87	+0.2
182,652	-		GFF514	0.87	+0.1
182,921	-		GFF515	0.19	+0.4
183,205	+		GFF515	0.57	-0.0
183,205	+		GFF515	0.57	-0.2
183,206	-		GFF515	0.57	+0.5
183,380	-		GFF515	0.81	+0.2
183,380	-		GFF515	0.81	+0.6
183,487	+				+0.6
183,487	+				+0.6
183,487	+				-0.2
183,487	+				-0.3
183,487	+				-0.1
183,607	-		GFF516	0.17	-0.5
183,607	-		GFF516	0.17	-0.5
183,607	-		GFF516	0.17	+0.7
183,636	+		GFF516	0.24	+2.0
183,636	+		GFF516	0.24	-0.0
183,804	+		GFF516	0.62	+0.7
183,804	+		GFF516	0.62	+0.2
184,124	-				+0.5
184,135	+				-0.2
184,136	-				+0.2
184,504	+		GFF517	0.27	-0.2
184,505	-		GFF517	0.27	+0.1
184,514	-		GFF517	0.27	-0.9