Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5008

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
2,021,870	+		GFF5007	0.37	+1.4
2,022,515	+				-0.1
2,022,531	+				+0.3
2,022,531	+				-0.2
2,022,532	-				-0.1
2,022,532	-				+1.3
2,022,532	-				-0.0
2,022,532	-				+0.5
2,022,532	-				+0.0
2,022,532	-				-1.1
2,022,532	-				+0.4
2,023,062	+		GFF5008	0.48	+0.0
2,023,062	+		GFF5008	0.48	+0.5
2,023,749	-		GFF5009	0.11	-0.1
2,023,784	+		GFF5009	0.13	+0.1
2,023,785	-		GFF5009	0.13	+0.7
2,023,785	-		GFF5009	0.13	+0.1
2,024,330	+		GFF5009	0.46	-0.2
2,024,330	+		GFF5009	0.46	-0.2
2,024,331	-		GFF5009	0.46	-0.2
2,024,331	-		GFF5009	0.46	-0.2
2,024,414	+		GFF5009	0.51	-0.6