Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4586

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
1,529,396	+		GFF4584	0.54	-0.9
1,529,433	-		GFF4584	0.57	-0.9
1,529,433	-		GFF4584	0.57	+0.2
1,529,561	+		GFF4584	0.64	-0.5
1,529,562	-		GFF4584	0.64	+0.1
1,529,562	-		GFF4584	0.64	+0.3
1,529,562	-		GFF4584	0.64	+0.9
1,529,562	-		GFF4584	0.64	-0.8
1,529,562	-		GFF4584	0.64	-0.2
1,529,562	-		GFF4584	0.64	+1.5
1,529,571	+		GFF4584	0.65	-0.2
1,529,571	+		GFF4584	0.65	+0.5
1,529,572	-		GFF4584	0.65	-0.0
1,529,747	+		GFF4584	0.75	-0.5
1,529,747	+		GFF4584	0.75	+0.9
1,529,747	+		GFF4584	0.75	+0.3
1,529,747	+		GFF4584	0.75	+0.2
1,529,747	+		GFF4584	0.75	-0.2
1,529,748	-		GFF4584	0.75	-1.1
1,529,877	-		GFF4584	0.82	+0.9
1,529,922	-		GFF4584	0.85	+0.0
1,530,241	+		GFF4585	0.36	-1.1
1,530,241	+		GFF4585	0.36	+0.2
1,530,242	-		GFF4585	0.36	+0.9
1,530,242	-		GFF4585	0.36	+0.3
1,530,330	-		GFF4585	0.76	+0.2
1,530,834	+		GFF4586	0.29	-0.1
1,530,835	-		GFF4586	0.29	+0.2
1,530,835	-		GFF4586	0.29	+0.1
1,530,835	-		GFF4586	0.29	+0.2
1,530,867	+		GFF4586	0.31	-0.1
1,530,867	+		GFF4586	0.31	+0.1
1,530,868	-		GFF4586	0.31	-0.9
1,530,913	-		GFF4586	0.34	+1.2
1,530,952	-		GFF4586	0.36	-0.0
1,531,314	+		GFF4586	0.58	+0.1
1,531,314	+		GFF4586	0.58	-0.5
1,531,557	+		GFF4586	0.73	-0.4
1,531,557	+		GFF4586	0.73	+0.9
1,531,866	+				-0.3
1,531,983	+				-0.5
1,531,983	+				+0.1
1,531,983	+				-0.2
1,531,984	-				-0.1
1,532,051	+				+0.5
1,532,052	-				+0.5
1,532,096	+				-0.1
1,532,132	+				+0.7
1,532,132	+				+0.0
1,532,132	+				+0.0
1,532,132	+				-0.2
1,532,132	+				+0.2
1,532,132	+				+0.2
1,532,132	+				-0.9
1,532,132	+				-0.1
1,532,132	+				-0.5
1,532,132	+				-0.1
1,532,132	+				-1.1
1,532,132	+				+1.3
1,532,132	+				+0.1
1,532,133	-				+0.0
1,532,133	-				-1.1
1,532,133	-				+0.3
1,532,133	-				-1.0
1,532,133	-				-1.1
1,532,133	-				-2.1
1,532,133	-				+0.1
1,532,133	-				-0.6
1,532,133	-				-0.5
1,532,133	-				-0.4
1,532,136	+				+0.3
1,532,136	+				+0.4
1,532,136	+				+0.3
1,532,136	+				+0.4
1,532,137	-				+0.3
1,532,137	-				-0.3
1,532,137	-				-0.0
1,532,287	+		GFF4587	0.12	-0.3
1,532,287	+		GFF4587	0.12	-0.2
1,532,287	+		GFF4587	0.12	-0.3
1,532,288	-		GFF4587	0.12	+0.4
1,532,425	+		GFF4587	0.23	-0.5
1,532,518	+		GFF4587	0.31	+0.3
1,532,519	-		GFF4587	0.31	+0.5
1,532,569	+		GFF4587	0.35	-0.1
1,532,570	-		GFF4587	0.35	-0.0
1,532,659	+		GFF4587	0.42	-0.0
1,532,659	+		GFF4587	0.42	+1.5
1,532,659	+		GFF4587	0.42	+0.2
1,532,659	+		GFF4587	0.42	+0.7
1,532,660	-		GFF4587	0.42	-1.1
1,532,660	-		GFF4587	0.42	-0.1
1,532,660	-		GFF4587	0.42	-0.0
1,532,660	-		GFF4587	0.42	+0.4
1,532,677	+		GFF4587	0.44	+0.2
1,532,677	+		GFF4587	0.44	-0.4
1,532,798	-		GFF4587	0.53	-0.2
1,532,917	+		GFF4587	0.63	-0.5
1,532,917	+		GFF4587	0.63	-0.4
1,532,917	+		GFF4587	0.63	-0.9
1,532,977	+		GFF4587	0.68	-0.1
1,532,977	+		GFF4587	0.68	+0.3
1,532,977	+		GFF4587	0.68	+0.9
1,532,998	+		GFF4587	0.70	+0.6
1,532,999	-		GFF4587	0.70	-0.9
1,532,999	-		GFF4587	0.70	+0.5
1,532,999	-		GFF4587	0.70	+0.1