Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3461

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
340,667	-		GFF3460	0.46	-1.0
341,227	-		GFF3460	0.79	-1.6
341,539	+				+1.2
341,540	-				+0.1
341,540	-				-0.6
341,563	+				-0.1
341,564	-				+0.4
341,649	-				+0.5
341,808	+		GFF3461	0.25	+0.3
342,086	+		GFF3461	0.61	+0.3
342,481	-				+1.3
342,864	+		GFF3462	0.27	+0.3
342,865	-		GFF3462	0.27	+0.0
342,865	-		GFF3462	0.27	-0.4
342,865	-		GFF3462	0.27	+0.2
343,216	-		GFF3462	0.47	+0.3