Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3456

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
337,019	-		GFF3455	0.79	+0.9
337,112	-		GFF3455	0.83	+0.2
337,231	+		GFF3455	0.89	-1.6
337,276	+				-0.2
337,531	-				+0.1
337,532	+				-0.3
337,532	+				-0.6
337,620	+				+0.2
337,721	+		GFF3456	0.21	-0.3
337,780	+		GFF3456	0.61	-1.2
337,780	+		GFF3456	0.61	-0.2
337,781	-		GFF3456	0.62	+0.0
337,781	-		GFF3456	0.62	-0.3
338,244	-		GFF3457	0.31	+0.2
338,397	-		GFF3457	0.47	-0.2
338,467	+		GFF3457	0.55	-0.0
338,516	-		GFF3457	0.60	+0.8
338,523	+		GFF3457	0.61	+2.5
338,523	+		GFF3457	0.61	+0.2