Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3400

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
284,161	-		GFF3399	0.34	+0.6
284,331	+		GFF3399	0.50	-0.1
284,332	-		GFF3399	0.50	+0.9
284,478	+		GFF3399	0.64	-0.3
284,601	+		GFF3399	0.76	-0.1
284,830	+				-1.3
284,972	+		GFF3400	0.13	+0.4
284,972	+		GFF3400	0.13	-0.2
284,973	-		GFF3400	0.13	-0.9
285,654	-				+0.5
285,719	+				-0.3
285,823	-				+1.4
285,864	+				-0.6
286,194	+		GFF3401	0.23	-1.1
286,194	+		GFF3401	0.23	+0.4
286,195	-		GFF3401	0.23	-0.1
286,285	-		GFF3401	0.28	+0.5