Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2884

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
474,859	-				+0.4
475,065	+		GFF2884	0.34	+0.6
475,066	-		GFF2884	0.34	+1.2
475,167	+		GFF2884	0.49	-0.1
475,504	-				+0.4
475,770	-		GFF2885	0.17	-0.4
475,770	-		GFF2885	0.17	-0.2
475,994	+		GFF2885	0.35	-0.2
476,274	-		GFF2885	0.58	+2.4
476,459	+		GFF2885	0.73	+1.1
476,469	-		GFF2885	0.74	+0.4
476,513	+		GFF2885	0.78	-0.5
476,516	+		GFF2885	0.78	+0.8
476,517	-		GFF2885	0.78	-0.9