Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF1493

Experiment: Ying_AminoAcid20 rep B; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep B; time point 3
341,328	+		GFF1492	0.21	+0.3
341,454	+		GFF1492	0.37	-0.1
341,919	+				+0.4
342,131	+		GFF1493	0.16	-0.3
342,302	+		GFF1493	0.32	+0.5
342,434	+		GFF1493	0.44	-0.4
342,434	+		GFF1493	0.44	+0.2
342,434	+		GFF1493	0.44	-0.2
342,435	-		GFF1493	0.44	-0.1
342,435	-		GFF1493	0.44	-0.7
343,099	-				+0.4
343,099	-				-0.6
343,099	-				+0.3
343,099	-				-0.6
343,575	+		GFF1494	0.43	+0.0
343,576	-		GFF1494	0.43	+1.0
343,576	-		GFF1494	0.43	+0.2