Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5824

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
18,579	-				-0.6
18,579	-				+0.0
18,579	-				+0.9
19,077	+		GFF5824	0.30	-0.2
19,266	+		GFF5824	0.45	+0.5
19,342	+		GFF5824	0.51	+0.1
19,362	+		GFF5824	0.52	+0.4
19,363	-		GFF5824	0.53	+0.1
19,363	-		GFF5824	0.53	-0.2
19,413	+		GFF5824	0.56	+0.4
19,414	-		GFF5824	0.56	-1.1
19,659	+		GFF5824	0.75	-0.6
19,728	+		GFF5824	0.81	+2.2
19,909	-				-1.1
19,910	-				-0.1
20,162	+		GFF5825	0.10	-0.7
20,825	-		GFF5825	0.51	-0.5
20,825	-		GFF5825	0.51	-0.1
20,825	-		GFF5825	0.51	+0.3
20,831	-		GFF5825	0.51	-0.0