Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3348

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
233,177	+				-1.9
233,507	+		GFF3348	0.34	-0.6
233,507	+		GFF3348	0.34	-0.4
233,507	+		GFF3348	0.34	-0.9
233,726	+		GFF3348	0.61	-1.2
233,726	+		GFF3348	0.61	-1.5
233,727	-		GFF3348	0.61	-0.8
233,727	-		GFF3348	0.61	-1.6
233,727	-		GFF3348	0.61	-1.0
233,737	-		GFF3348	0.63	-1.3
233,909	+		GFF3348	0.84	-0.5
233,909	+		GFF3348	0.84	+0.6
233,910	-		GFF3348	0.84	-1.2