Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3184

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
63,348	+				+0.9
63,349	-				-0.1
63,638	+				+1.3
63,639	-				-0.3
63,649	-				+0.4
63,675	+				-1.1
63,988	-				+0.2
63,988	-				+0.5
64,269	+		GFF3184	0.17	+1.3
64,539	+		GFF3184	0.38	-0.2
64,539	+		GFF3184	0.38	-1.4
64,539	+		GFF3184	0.38	+0.4
64,540	-		GFF3184	0.38	+0.0
64,559	+		GFF3184	0.39	-0.3
65,061	-		GFF3184	0.78	+0.7
65,175	+		GFF3184	0.86	-0.1
65,248	+				-1.8
65,248	+				+0.9
65,248	+				-0.2
65,248	+				-0.3
65,248	+				+1.1
65,249	-				-0.3
65,250	-				+0.3
65,619	-				+0.1
65,821	+				+0.3
65,821	+				+0.9
65,951	+		GFF3185	0.61	+0.3