Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2479

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
61,116	-		GFF2478	0.12	+0.0
61,466	+		GFF2478	0.44	+0.1
61,466	+		GFF2478	0.44	+0.5
61,466	+		GFF2478	0.44	+0.4
61,467	-		GFF2478	0.44	-0.6
61,467	-		GFF2478	0.44	-0.3
61,467	-		GFF2478	0.44	-1.2
61,467	-		GFF2478	0.44	-0.7
62,822	-		GFF2479	0.80	-0.6
63,518	+				+1.1
63,518	+				-0.2
63,519	-				+0.3
63,519	-				-0.6
63,519	-				-0.6
63,519	-				-1.3
63,519	-				-0.1