Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2404

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
49,738	+		GFF2403	0.57	+0.4
49,739	-		GFF2403	0.57	-0.6
50,529	+				+0.7
50,575	-				-0.7
50,575	-				-0.5
50,688	-		GFF2404	0.15	+0.5
50,916	+		GFF2404	0.38	+0.2
50,917	-		GFF2404	0.38	-1.6
51,012	+		GFF2404	0.48	+0.6
51,013	-		GFF2404	0.48	-0.8
51,285	+		GFF2404	0.76	-0.5
51,285	+		GFF2404	0.76	-1.1
51,730	+		GFF2405	0.17	+1.0
51,730	+		GFF2405	0.17	-0.3
51,731	-		GFF2405	0.17	-0.6
51,731	-		GFF2405	0.17	+0.3
51,733	+		GFF2405	0.17	+0.1
52,253	-		GFF2405	0.65	-1.8