Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2263

Experiment: Ying_AminoAcid20 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_AminoAcid20 rep A; time point 3
1,146,455	+		GFF2261	0.65	-0.5
1,146,455	+		GFF2261	0.65	-0.1
1,146,546	-		GFF2261	0.70	+0.3
1,146,605	+		GFF2261	0.74	+0.3
1,146,705	-		GFF2261	0.80	-0.1
1,146,705	-		GFF2261	0.80	-0.3
1,146,705	-		GFF2261	0.80	+0.0
1,146,705	-		GFF2261	0.80	-0.3
1,146,705	-		GFF2261	0.80	-0.5
1,146,705	-		GFF2261	0.80	+0.6
1,146,819	-		GFF2261	0.87	+0.4
1,146,923	+				+0.5
1,147,043	+				-0.1
1,147,225	+				+0.5
1,147,225	+				-0.2
1,147,225	+				+1.0
1,147,226	-				-2.0
1,147,277	+				-1.0
1,147,277	+				+0.0
1,147,278	-				-0.0
1,147,314	+				+0.0
1,147,314	+				-0.5
1,147,315	-				-0.2
1,147,315	-				-0.2
1,147,315	-				+0.5
1,147,380	+				-0.2
1,147,381	-				+0.4
1,147,521	+				+1.2
1,147,522	-				-1.3
1,147,522	-				-1.8
1,147,522	-				-0.5
1,147,597	+				+0.3
1,147,597	+				-2.3
1,147,597	+				-0.0
1,147,597	+				-0.0
1,147,597	+				+0.5
1,147,598	-				+0.6
1,147,598	-				-0.1
1,147,598	-				-0.4
1,147,662	+				+0.2
1,147,662	+				+0.1
1,147,662	+				-0.9
1,147,662	+				+0.4
1,147,663	-				-0.2
1,147,663	-				-0.0
1,147,663	-				+0.0
1,147,663	-				-1.0
1,147,699	+				-0.1
1,147,699	+				-0.6
1,147,699	+				+0.4
1,147,699	+				+0.2
1,147,700	-				-1.7
1,147,769	+		GFF2263	0.11	-2.0
1,147,771	+		GFF2263	0.11	-0.5
1,147,771	+		GFF2263	0.11	-0.0
1,147,771	+		GFF2263	0.11	-1.1
1,147,772	-		GFF2263	0.11	+0.6
1,147,772	-		GFF2263	0.11	+1.0
1,147,779	+		GFF2263	0.12	-1.0
1,147,779	+		GFF2263	0.12	-0.6
1,147,779	+		GFF2263	0.12	-0.3
1,147,779	+		GFF2263	0.12	-0.2
1,147,779	+		GFF2263	0.12	+0.2
1,147,780	-		GFF2263	0.12	+0.5
1,147,780	-		GFF2263	0.12	+1.0
1,147,780	-		GFF2263	0.12	+1.0
1,147,780	-		GFF2263	0.12	-1.1
1,147,849	+		GFF2263	0.14	-0.6
1,147,850	-		GFF2263	0.14	+1.0
1,147,860	+		GFF2263	0.14	-0.0
1,147,860	+		GFF2263	0.14	-0.3
1,147,860	+		GFF2263	0.14	+1.3
1,147,860	+		GFF2263	0.14	+0.5
1,147,860	+		GFF2263	0.14	-0.3
1,147,860	+		GFF2263	0.14	-2.0
1,147,860	+		GFF2263	0.14	+0.3
1,147,860	+		GFF2263	0.14	+0.0
1,147,860	+		GFF2263	0.14	-1.5
1,147,860	+		GFF2263	0.14	-0.3
1,147,860	+		GFF2263	0.14	-0.5
1,147,860	+		GFF2263	0.14	-1.8
1,147,860	+		GFF2263	0.14	-0.1
1,147,861	-		GFF2263	0.14	-2.3
1,147,861	-		GFF2263	0.14	+0.0
1,147,861	-		GFF2263	0.14	-0.4
1,147,861	-		GFF2263	0.14	-0.6
1,147,861	-		GFF2263	0.14	+0.0
1,147,861	-		GFF2263	0.14	+0.4
1,147,861	-		GFF2263	0.14	-0.3
1,147,861	-		GFF2263	0.14	+0.2
1,147,861	-		GFF2263	0.14	+0.0
1,147,861	-		GFF2263	0.14	+0.1
1,147,861	-		GFF2263	0.14	+0.5
1,147,861	-		GFF2263	0.14	-0.8
1,147,861	-		GFF2263	0.14	+0.1
1,147,861	-		GFF2263	0.14	+0.3
1,147,879	-		GFF2263	0.14	-0.2
1,147,879	-		GFF2263	0.14	+0.4
1,147,879	-		GFF2263	0.14	+0.8
1,147,879	-		GFF2263	0.14	-0.5
1,147,928	-		GFF2263	0.16	+0.2
1,147,928	-		GFF2263	0.16	-2.0
1,147,928	-		GFF2263	0.16	+0.6
1,148,007	+		GFF2263	0.18	+0.4
1,148,008	+		GFF2263	0.18	-0.9
1,148,008	+		GFF2263	0.18	-0.9
1,148,008	+		GFF2263	0.18	+0.5
1,148,008	+		GFF2263	0.18	+2.6
1,148,008	+		GFF2263	0.18	+0.8
1,148,009	+		GFF2263	0.18	+0.8
1,148,009	-		GFF2263	0.18	-0.7
1,148,009	-		GFF2263	0.18	-1.3
1,148,009	-		GFF2263	0.18	+0.5
1,148,009	-		GFF2263	0.18	-0.5
1,148,009	-		GFF2263	0.18	-0.3
1,148,039	-		GFF2263	0.19	-0.2
1,148,039	-		GFF2263	0.19	+0.7
1,148,164	+		GFF2263	0.23	-0.8
1,148,165	-		GFF2263	0.23	+0.6
1,148,313	+		GFF2263	0.27	+0.3
1,148,313	+		GFF2263	0.27	-0.3
1,148,313	+		GFF2263	0.27	+1.0
1,148,313	+		GFF2263	0.27	+0.5
1,148,314	-		GFF2263	0.27	+0.4
1,148,314	-		GFF2263	0.27	+1.0
1,148,314	-		GFF2263	0.27	-0.4
1,148,314	-		GFF2263	0.27	-0.3
1,148,371	+		GFF2263	0.29	-0.8
1,148,371	+		GFF2263	0.29	+0.0
1,148,371	+		GFF2263	0.29	-0.0
1,148,371	+		GFF2263	0.29	-0.1
1,148,372	-		GFF2263	0.29	+0.3
1,148,372	-		GFF2263	0.29	+0.1
1,148,372	-		GFF2263	0.29	+0.6
1,148,372	-		GFF2263	0.29	-0.5
1,148,372	-		GFF2263	0.29	-0.5
1,148,372	-		GFF2263	0.29	-0.1
1,148,372	-		GFF2263	0.29	-0.3
1,148,504	+		GFF2263	0.33	+0.1
1,148,581	+		GFF2263	0.35	-0.7
1,148,581	+		GFF2263	0.35	-1.1
1,148,581	+		GFF2263	0.35	+0.8
1,148,581	+		GFF2263	0.35	-0.3
1,148,581	+		GFF2263	0.35	-0.3
1,148,581	+		GFF2263	0.35	+0.6
1,148,581	+		GFF2263	0.35	-1.2
1,148,581	+		GFF2263	0.35	-0.6
1,148,581	+		GFF2263	0.35	-0.1
1,148,581	+		GFF2263	0.35	-1.3
1,148,581	+		GFF2263	0.35	+0.0
1,148,582	-		GFF2263	0.35	+0.4
1,148,582	-		GFF2263	0.35	+1.0
1,148,582	-		GFF2263	0.35	-0.1
1,148,582	-		GFF2263	0.35	-0.1
1,148,582	-		GFF2263	0.35	+0.4
1,148,582	-		GFF2263	0.35	-0.4
1,148,582	-		GFF2263	0.35	+1.8
1,148,582	-		GFF2263	0.35	-0.1
1,148,582	-		GFF2263	0.35	-0.5
1,148,582	-		GFF2263	0.35	-0.3
1,148,582	-		GFF2263	0.35	+0.0
1,148,582	-		GFF2263	0.35	-0.5
1,148,582	-		GFF2263	0.35	+0.0
1,148,666	+		GFF2263	0.37	-0.5
1,148,667	-		GFF2263	0.37	-0.4
1,148,970	+		GFF2263	0.46	+0.5
1,148,970	+		GFF2263	0.46	+0.2
1,148,970	+		GFF2263	0.46	-0.5
1,148,970	+		GFF2263	0.46	-0.2
1,148,971	-		GFF2263	0.46	-0.4
1,148,971	-		GFF2263	0.46	-1.4
1,148,971	-		GFF2263	0.46	-0.7
1,148,971	-		GFF2263	0.46	+0.4
1,148,971	-		GFF2263	0.46	+0.3
1,148,971	-		GFF2263	0.46	+0.1
1,148,971	-		GFF2263	0.46	+0.1
1,148,971	-		GFF2263	0.46	+0.0
1,148,971	-		GFF2263	0.46	-0.3
1,149,022	+		GFF2263	0.48	+0.1
1,149,022	+		GFF2263	0.48	-0.2
1,149,022	+		GFF2263	0.48	-0.2
1,149,022	+		GFF2263	0.48	-0.8
1,149,022	+		GFF2263	0.48	-1.3
1,149,022	+		GFF2263	0.48	+0.5
1,149,022	+		GFF2263	0.48	-0.3
1,149,022	+		GFF2263	0.48	-1.5
1,149,022	+		GFF2263	0.48	-0.8
1,149,022	+		GFF2263	0.48	+1.0
1,149,022	+		GFF2263	0.48	+0.2
1,149,022	+		GFF2263	0.48	-0.0
1,149,022	+		GFF2263	0.48	-1.0
1,149,022	+		GFF2263	0.48	+0.0
1,149,022	+		GFF2263	0.48	-0.1
1,149,022	+		GFF2263	0.48	+0.0
1,149,022	+		GFF2263	0.48	+1.0
1,149,022	+		GFF2263	0.48	+0.4
1,149,022	+		GFF2263	0.48	-0.1
1,149,022	+		GFF2263	0.48	-0.8
1,149,022	+		GFF2263	0.48	-0.2
1,149,022	+		GFF2263	0.48	-0.2
1,149,022	+		GFF2263	0.48	-0.1
1,149,022	+		GFF2263	0.48	+0.6
1,149,022	+		GFF2263	0.48	+1.0
1,149,022	+		GFF2263	0.48	+0.3
1,149,022	+		GFF2263	0.48	-0.1
1,149,022	+		GFF2263	0.48	-0.4
1,149,022	+		GFF2263	0.48	-0.3
1,149,022	+		GFF2263	0.48	-0.4
1,149,023	-		GFF2263	0.48	-0.4
1,149,023	-		GFF2263	0.48	+0.5
1,149,023	-		GFF2263	0.48	+1.0
1,149,023	-		GFF2263	0.48	-0.7
1,149,023	-		GFF2263	0.48	-0.1
1,149,023	-		GFF2263	0.48	+0.7
1,149,023	-		GFF2263	0.48	+0.4
1,149,023	-		GFF2263	0.48	-0.1
1,149,023	-		GFF2263	0.48	-0.1
1,149,023	-		GFF2263	0.48	+0.3
1,149,023	-		GFF2263	0.48	-0.1
1,149,023	-		GFF2263	0.48	+0.1
1,149,023	-		GFF2263	0.48	-0.2
1,149,023	-		GFF2263	0.48	-0.9
1,149,023	-		GFF2263	0.48	+1.4
1,149,023	-		GFF2263	0.48	+0.3
1,149,023	-		GFF2263	0.48	-0.1
1,149,023	-		GFF2263	0.48	+0.2
1,149,023	-		GFF2263	0.48	-0.2
1,149,023	-		GFF2263	0.48	-0.2
1,149,023	-		GFF2263	0.48	+0.6
1,149,023	-		GFF2263	0.48	+0.5
1,149,023	-		GFF2263	0.48	+0.0
1,149,023	-		GFF2263	0.48	-0.4
1,149,023	-		GFF2263	0.48	-0.5
1,149,023	-		GFF2263	0.48	-0.1
1,149,023	-		GFF2263	0.48	+0.5
1,149,023	-		GFF2263	0.48	-0.1
1,149,023	-		GFF2263	0.48	-0.3
1,149,023	-		GFF2263	0.48	-0.6
1,149,023	-		GFF2263	0.48	-2.0
1,149,023	-		GFF2263	0.48	-0.4
1,149,023	-		GFF2263	0.48	+1.6
1,149,023	-		GFF2263	0.48	-0.3
1,149,023	-		GFF2263	0.48	-0.7
1,149,023	-		GFF2263	0.48	+0.4
1,149,023	-		GFF2263	0.48	-0.3
1,149,023	-		GFF2263	0.48	+0.5
1,149,023	-		GFF2263	0.48	-0.2
1,149,023	-		GFF2263	0.48	-2.1
1,149,023	-		GFF2263	0.48	-0.9
1,149,023	-		GFF2263	0.48	+0.2
1,149,023	-		GFF2263	0.48	-0.4
1,149,023	-		GFF2263	0.48	+0.0
1,149,037	+		GFF2263	0.48	-0.2
1,149,052	+		GFF2263	0.48	+0.0
1,149,052	+		GFF2263	0.48	-0.3
1,149,052	+		GFF2263	0.48	-0.0
1,149,052	+		GFF2263	0.48	-0.2
1,149,053	-		GFF2263	0.48	-0.2
1,149,053	-		GFF2263	0.48	-1.0
1,149,067	+		GFF2263	0.49	-0.2
1,149,068	-		GFF2263	0.49	-0.4
1,149,131	+		GFF2263	0.51	+0.7
1,149,131	+		GFF2263	0.51	+0.4
1,149,131	+		GFF2263	0.51	+0.0
1,149,141	+		GFF2263	0.51	-1.0
1,149,270	+		GFF2263	0.55	-0.3
1,149,270	+		GFF2263	0.55	-0.6
1,149,270	+		GFF2263	0.55	-1.0
1,149,271	-		GFF2263	0.55	-1.0
1,149,276	+		GFF2263	0.55	-0.3
1,149,395	+		GFF2263	0.58	-1.0
1,149,396	-		GFF2263	0.58	-0.2
1,149,407	+		GFF2263	0.59	+0.1
1,149,407	+		GFF2263	0.59	+0.2
1,149,407	+		GFF2263	0.59	-0.1
1,149,407	+		GFF2263	0.59	+0.5
1,149,407	+		GFF2263	0.59	-0.8
1,149,407	+		GFF2263	0.59	+0.5
1,149,407	+		GFF2263	0.59	-0.2
1,149,407	+		GFF2263	0.59	+0.7
1,149,408	-		GFF2263	0.59	-1.1
1,149,411	+		GFF2263	0.59	+0.3
1,149,411	+		GFF2263	0.59	+0.0
1,149,411	+		GFF2263	0.59	+0.6
1,149,411	+		GFF2263	0.59	-1.5
1,149,411	+		GFF2263	0.59	+0.3
1,149,411	+		GFF2263	0.59	-0.8
1,149,411	+		GFF2263	0.59	-0.2
1,149,411	+		GFF2263	0.59	-0.6
1,149,411	+		GFF2263	0.59	-0.2
1,149,411	+		GFF2263	0.59	+0.1
1,149,411	+		GFF2263	0.59	+0.0
1,149,411	+		GFF2263	0.59	-0.2
1,149,412	-		GFF2263	0.59	-0.2
1,149,412	-		GFF2263	0.59	-0.3
1,149,412	-		GFF2263	0.59	-2.2
1,149,522	+		GFF2263	0.62	-2.1
1,149,522	+		GFF2263	0.62	-0.2
1,149,522	+		GFF2263	0.62	+2.0
1,149,523	-		GFF2263	0.62	+0.5
1,149,523	-		GFF2263	0.62	+0.7
1,149,523	-		GFF2263	0.62	+0.8
1,149,535	+		GFF2263	0.62	+0.3
1,149,651	+		GFF2263	0.66	+0.3
1,149,651	+		GFF2263	0.66	+0.5
1,149,651	+		GFF2263	0.66	-0.2
1,149,651	+		GFF2263	0.66	-0.7
1,149,652	-		GFF2263	0.66	-1.3
1,149,652	-		GFF2263	0.66	-0.4
1,149,652	-		GFF2263	0.66	+0.1
1,149,652	-		GFF2263	0.66	-0.2
1,149,652	-		GFF2263	0.66	-0.1
1,149,652	-		GFF2263	0.66	+0.2
1,149,652	-		GFF2263	0.66	-0.3
1,149,693	+		GFF2263	0.67	-0.3
1,149,693	+		GFF2263	0.67	+0.6
1,149,694	-		GFF2263	0.67	-0.4
1,149,736	+		GFF2263	0.68	+0.5
1,149,736	+		GFF2263	0.68	+0.8
1,149,736	+		GFF2263	0.68	-0.9
1,149,737	-		GFF2263	0.68	-0.4
1,149,737	-		GFF2263	0.68	-0.5
1,149,764	+		GFF2263	0.69	-1.0
1,149,764	+		GFF2263	0.69	-0.2
1,149,764	+		GFF2263	0.69	+0.1
1,149,764	+		GFF2263	0.69	-0.3
1,149,764	+		GFF2263	0.69	+0.7
1,149,764	+		GFF2263	0.69	+0.8
1,149,765	-		GFF2263	0.69	-0.1
1,149,765	-		GFF2263	0.69	-0.5
1,149,795	+		GFF2263	0.70	-0.2
1,149,795	+		GFF2263	0.70	-0.7
1,149,795	+		GFF2263	0.70	-0.6
1,149,795	+		GFF2263	0.70	+0.2
1,149,795	+		GFF2263	0.70	-0.0
1,149,795	+		GFF2263	0.70	-0.1
1,149,795	+		GFF2263	0.70	+0.1
1,149,796	-		GFF2263	0.70	+0.0
1,149,796	-		GFF2263	0.70	-2.3
1,149,796	-		GFF2263	0.70	+2.0
1,149,796	-		GFF2263	0.70	+1.0
1,149,796	-		GFF2263	0.70	+0.0
1,149,796	-		GFF2263	0.70	+0.3
1,149,796	-		GFF2263	0.70	+0.3
1,149,806	+		GFF2263	0.70	-1.0
1,149,807	+		GFF2263	0.70	-0.8
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