Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF830

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
525,375	+		GFF829	0.49	+1.5
525,376	-		GFF829	0.49	+2.0
525,780	+		GFF829	0.74	+2.1
525,780	+		GFF829	0.74	+2.5
525,781	-		GFF829	0.74	+0.6
526,263	+				-0.7
526,264	-				+0.3
527,197	-				-0.5
527,205	+				+0.8
527,206	-				-0.1
527,236	+				-0.4
527,237	-				+0.7
527,279	+				-0.3
527,280	-				-0.7
527,280	-				-1.0
527,339	+				+5.7
527,339	+				+5.0
527,339	+				+5.2
527,340	-				+5.8
527,340	-				+5.2
527,340	-				+6.1
528,119	+		GFF831	0.81	+5.8
528,119	+		GFF831	0.81	+5.5
528,119	+		GFF831	0.81	+5.4
528,119	+		GFF831	0.81	+4.7
528,119	+		GFF831	0.81	+4.4
528,120	-		GFF831	0.81	+3.6
528,120	-		GFF831	0.81	+5.3