Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5673

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
2,695,628	-		GFF5671	0.87	-1.0
2,695,628	-		GFF5671	0.87	-0.6
2,695,628	-		GFF5671	0.87	+0.1
2,696,072	+		GFF5672	0.48	-1.2
2,696,308	+				+0.3
2,696,580	-		GFF5673	0.45	-0.9
2,696,603	+		GFF5673	0.53	-0.6
2,696,898	+		GFF5674	0.71	-1.1
2,696,899	-		GFF5674	0.72	-0.2
2,696,899	-		GFF5674	0.72	-1.3
2,696,955	+				-0.4
2,696,956	-				-0.4
2,697,008	+				+0.4
2,697,008	+				+0.4
2,697,009	-				-0.5
2,697,185	+		GFF5675	0.21	-0.2
2,697,185	+		GFF5675	0.21	+0.1
2,697,186	-		GFF5675	0.21	+1.2
2,697,186	-		GFF5675	0.21	-0.6
2,697,186	-		GFF5675	0.21	-1.9
2,697,186	-		GFF5675	0.21	-0.3
2,697,257	+		GFF5675	0.29	-1.9
2,697,258	-		GFF5675	0.29	+1.4
2,697,384	-		GFF5675	0.44	-0.8