Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5558

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
2,566,816	+		GFF5555	0.74	-1.1
2,566,817	-		GFF5555	0.74	+0.0
2,566,912	+		GFF5555	0.84	+0.9
2,567,072	+				-2.4
2,567,072	+				-0.0
2,567,073	-				+0.1
2,567,073	-				-0.3
2,567,114	+				+6.1
2,567,174	+		GFF5556	0.15	+1.2
2,567,420	+		GFF5556	0.67	+1.2
2,567,420	+		GFF5556	0.67	+1.7
2,567,420	+		GFF5556	0.67	+0.2
2,567,574	-				+0.8
2,567,988	+		GFF5558	0.17	+1.6
2,567,989	-		GFF5558	0.17	-0.6
2,568,021	+		GFF5558	0.20	+1.0
2,568,021	+		GFF5558	0.20	-0.1
2,568,021	+		GFF5558	0.20	-1.6
2,568,021	+		GFF5558	0.20	+0.2
2,568,021	+		GFF5558	0.20	-0.1
2,568,021	+		GFF5558	0.20	-0.2
2,568,021	+		GFF5558	0.20	+0.0
2,568,022	-		GFF5558	0.20	-0.4
2,568,022	-		GFF5558	0.20	+0.2
2,568,037	-		GFF5558	0.21	-0.3
2,568,195	+		GFF5558	0.35	-1.8
2,568,255	+		GFF5558	0.41	+1.4
2,568,255	+		GFF5558	0.41	+0.9
2,568,276	+		GFF5558	0.43	-1.0
2,568,306	+		GFF5558	0.45	-0.5
2,568,306	+		GFF5558	0.45	-0.8
2,568,306	+		GFF5558	0.45	+0.0
2,568,307	-		GFF5558	0.45	-1.8
2,568,396	+		GFF5558	0.53	+0.4
2,568,396	+		GFF5558	0.53	+0.5
2,568,396	+		GFF5558	0.53	-0.3
2,568,397	-		GFF5558	0.54	-0.8
2,568,672	+		GFF5558	0.78	+1.0
2,568,673	-		GFF5558	0.79	+0.8
2,568,673	-		GFF5558	0.79	-0.9
2,568,756	+		GFF5558	0.86	-0.0
2,568,757	-		GFF5558	0.86	-0.3
2,568,873	+				+0.4
2,569,505	-		GFF5559	0.25	-3.6
2,569,505	-		GFF5559	0.25	-1.4
2,569,567	+		GFF5559	0.28	-0.8
2,569,568	-		GFF5559	0.28	-3.7