Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5491

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
2,493,412	+		GFF5490	0.29	-0.5
2,493,412	+		GFF5490	0.29	+0.5
2,493,412	+		GFF5490	0.29	-0.6
2,493,710	-		GFF5490	0.53	+1.6
2,493,817	+		GFF5490	0.62	+0.4
2,493,817	+		GFF5490	0.62	+0.0
2,493,817	+		GFF5490	0.62	-0.2
2,493,817	+		GFF5490	0.62	-0.3
2,493,818	-		GFF5490	0.62	-0.1
2,493,818	-		GFF5490	0.62	+0.1
2,494,418	+		GFF5491	0.13	-2.2
2,494,514	+		GFF5491	0.23	+0.2
2,494,610	+		GFF5491	0.33	-2.8
2,494,611	-		GFF5491	0.33	-0.3
2,494,611	-		GFF5491	0.33	-3.1
2,495,981	+				-0.8
2,496,036	+				-1.0
2,496,149	+				+1.1
2,496,149	+				+2.4
2,496,149	+				+0.1
2,496,149	+				+1.4
2,496,150	-				-1.1
2,496,150	-				+0.2
2,496,150	-				+0.6
2,496,150	-				+1.5
2,496,150	-				+0.3
2,496,150	-				+2.3