Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5474

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
2,475,679	+		GFF5472	0.66	+1.0
2,476,163	+		GFF5473	0.30	-0.2
2,476,163	+		GFF5473	0.30	+2.1
2,476,163	+		GFF5473	0.30	-0.3
2,476,163	+		GFF5473	0.30	+1.2
2,476,817	-		GFF5474	0.32	+0.1
2,477,014	+		GFF5474	0.50	-1.2
2,477,014	+		GFF5474	0.50	+0.8
2,477,015	-		GFF5474	0.50	+0.3
2,477,015	-		GFF5474	0.50	+0.7
2,477,015	-		GFF5474	0.50	-0.1
2,477,015	-		GFF5474	0.50	+0.0
2,477,218	+		GFF5474	0.68	+0.3
2,477,219	-		GFF5474	0.68	-0.0
2,477,236	+		GFF5474	0.70	+0.5
2,477,236	+		GFF5474	0.70	-0.1
2,477,237	-		GFF5474	0.70	+0.3
2,477,237	-		GFF5474	0.70	+0.0
2,477,320	+		GFF5474	0.78	-0.7
2,477,320	+		GFF5474	0.78	-0.3
2,477,320	+		GFF5474	0.78	-0.0
2,477,320	+		GFF5474	0.78	-0.3
2,477,404	+		GFF5474	0.85	-0.2
2,477,404	+		GFF5474	0.85	-0.0
2,477,404	+		GFF5474	0.85	-0.5
2,477,404	+		GFF5474	0.85	+1.3
2,477,404	+		GFF5474	0.85	-0.5
2,477,405	-		GFF5474	0.85	+0.1
2,477,405	-		GFF5474	0.85	-0.1
2,477,405	-		GFF5474	0.85	-0.9
2,477,524	-				+0.7
2,477,578	+				-1.7
2,477,578	+				+0.3
2,477,579	-				+0.5
2,477,579	-				-0.2
2,478,264	-				-1.1
2,478,525	-		GFF5476	0.26	-0.6
2,478,552	-		GFF5476	0.28	-0.1