Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF49

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
48,439	+		GFF48	0.20	-0.4
48,440	-		GFF48	0.20	+0.1
48,581	-		GFF48	0.32	-0.3
48,614	-		GFF48	0.35	+1.2
48,728	-		GFF48	0.44	-0.1
48,766	+		GFF48	0.47	-1.2
48,766	+		GFF48	0.47	+1.0
48,767	-		GFF48	0.47	+0.1
48,889	+		GFF48	0.58	+0.5
49,213	+		GFF48	0.85	-0.2
49,402	+				+0.1
49,634	-		GFF49	0.15	+0.1
49,682	-		GFF49	0.18	-0.6
49,744	+		GFF49	0.21	+4.0
49,784	-		GFF49	0.24	+0.7
49,784	-		GFF49	0.24	-1.2
49,931	-		GFF49	0.33	-1.1
49,990	+		GFF49	0.37	-0.1
49,994	-		GFF49	0.37	-2.0
50,074	+		GFF49	0.42	+0.7
50,653	+		GFF49	0.78	-0.6
51,421	-		GFF50	0.31	-0.3
51,642	+		GFF50	0.50	+0.3
51,864	+		GFF50	0.70	+1.2
51,864	+		GFF50	0.70	+0.4
51,927	+		GFF50	0.75	-0.8