Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4740

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
1,708,464	-				-0.7
1,708,770	+		GFF4739	0.13	+1.0
1,708,827	+		GFF4739	0.21	-0.7
1,708,861	-		GFF4739	0.25	-0.8
1,709,055	+		GFF4739	0.50	+0.3
1,709,056	-		GFF4739	0.51	-0.5
1,709,339	+		GFF4739	0.87	-1.1
1,709,853	+		GFF4740	0.48	-1.7
1,709,853	+		GFF4740	0.48	+0.9
1,709,853	+		GFF4740	0.48	+2.5
1,709,853	+		GFF4740	0.48	+0.2
1,709,854	-		GFF4740	0.48	-0.4
1,709,854	-		GFF4740	0.48	+0.6
1,709,896	-		GFF4740	0.53	-1.1
1,710,099	+		GFF4740	0.77	+0.4
1,710,099	+		GFF4740	0.77	-0.2
1,710,099	+		GFF4740	0.77	+2.4
1,710,192	+		GFF4740	0.87	-0.2
1,710,192	+		GFF4740	0.87	-0.6
1,710,434	-		GFF4741	0.13	-0.4
1,710,434	-		GFF4741	0.13	-0.2
1,710,568	+		GFF4741	0.28	-2.2
1,710,569	-		GFF4741	0.28	-0.2
1,710,746	-		GFF4741	0.48	-1.4
1,710,757	+		GFF4741	0.49	+0.3
1,710,757	+		GFF4741	0.49	-0.1
1,710,757	+		GFF4741	0.49	+1.2
1,710,757	+		GFF4741	0.49	-1.2
1,710,757	+		GFF4741	0.49	+0.4
1,710,757	+		GFF4741	0.49	+0.5
1,710,757	+		GFF4741	0.49	-2.0
1,710,757	+		GFF4741	0.49	+0.3
1,710,758	-		GFF4741	0.49	-0.8
1,710,758	-		GFF4741	0.49	+0.1
1,710,758	-		GFF4741	0.49	+0.4
1,710,758	-		GFF4741	0.49	-0.9
1,710,758	-		GFF4741	0.49	-0.1
1,710,760	+		GFF4741	0.50	+0.0
1,710,761	-		GFF4741	0.50	+0.8
1,710,829	+		GFF4741	0.57	-0.6