Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4585

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
1,529,396	+		GFF4584	0.54	+0.0
1,529,433	-		GFF4584	0.57	+0.0
1,529,433	-		GFF4584	0.57	-0.1
1,529,561	+		GFF4584	0.64	-0.2
1,529,562	-		GFF4584	0.64	-2.6
1,529,562	-		GFF4584	0.64	-0.9
1,529,562	-		GFF4584	0.64	+0.2
1,529,562	-		GFF4584	0.64	+0.9
1,529,562	-		GFF4584	0.64	-0.9
1,529,562	-		GFF4584	0.64	+2.6
1,529,571	+		GFF4584	0.65	-0.7
1,529,571	+		GFF4584	0.65	-0.1
1,529,572	-		GFF4584	0.65	-0.7
1,529,747	+		GFF4584	0.75	-0.2
1,529,747	+		GFF4584	0.75	-0.4
1,529,747	+		GFF4584	0.75	-0.2
1,529,747	+		GFF4584	0.75	+0.5
1,529,747	+		GFF4584	0.75	-0.5
1,529,748	-		GFF4584	0.75	-0.8
1,529,877	-		GFF4584	0.82	+0.2
1,529,922	-		GFF4584	0.85	+0.1
1,530,241	+		GFF4585	0.36	-0.6
1,530,241	+		GFF4585	0.36	-0.6
1,530,242	-		GFF4585	0.36	+0.2
1,530,242	-		GFF4585	0.36	-1.0
1,530,330	-		GFF4585	0.76	+0.1
1,530,834	+		GFF4586	0.29	-0.8
1,530,835	-		GFF4586	0.29	+0.3
1,530,835	-		GFF4586	0.29	-0.6
1,530,835	-		GFF4586	0.29	-0.5
1,530,867	+		GFF4586	0.31	-0.2
1,530,867	+		GFF4586	0.31	-0.0
1,530,868	-		GFF4586	0.31	-1.6
1,530,913	-		GFF4586	0.34	+0.8
1,530,952	-		GFF4586	0.36	+0.5
1,531,314	+		GFF4586	0.58	-0.3
1,531,314	+		GFF4586	0.58	-1.8