Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4481

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
1,408,383	-		GFF4479	0.71	-0.8
1,408,555	+		GFF4479	0.89	-0.5
1,408,555	+		GFF4479	0.89	-0.8
1,408,555	+		GFF4479	0.89	-0.3
1,408,556	-		GFF4479	0.89	-1.1
1,408,694	+				-0.5
1,408,695	-				+0.7
1,408,695	-				-0.2
1,408,784	+		GFF4480	0.22	-0.9
1,408,784	+		GFF4480	0.22	-0.6
1,408,784	+		GFF4480	0.22	-0.6
1,408,785	-		GFF4480	0.22	+0.2
1,408,785	-		GFF4480	0.22	+0.2
1,408,785	-		GFF4480	0.22	-1.4
1,409,090	+				+0.2
1,409,090	+				+0.9
1,409,091	-				+1.2
1,409,180	+				+1.3
1,409,180	+				-0.4
1,409,181	-				-0.8
1,409,181	-				-1.4
1,409,181	-				+0.5
1,409,181	-				-0.2
1,409,186	+				+0.7
1,409,186	+				+0.3
1,409,858	+		GFF4481	0.70	-0.4
1,409,858	+		GFF4481	0.70	+3.1
1,409,859	-		GFF4481	0.70	+0.1
1,409,894	+		GFF4481	0.74	-0.1
1,409,895	-		GFF4481	0.74	+0.8
1,409,895	-		GFF4481	0.74	+2.6
1,409,904	-		GFF4481	0.75	-1.9
1,411,043	+				-1.3
1,411,161	+		GFF4483	0.13	+1.0
1,411,161	+		GFF4483	0.13	-1.4
1,411,161	+		GFF4483	0.13	-0.3
1,411,162	-		GFF4483	0.13	+0.2
1,411,162	-		GFF4483	0.13	-0.2