Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4460

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
1,387,735	+				-0.7
1,387,735	+				+1.5
1,387,736	-				+0.8
1,388,103	-		GFF4459	0.84	-1.1
1,388,342	+		GFF4460	0.44	-0.7
1,388,343	-		GFF4460	0.45	-0.4
1,388,343	-		GFF4460	0.45	-0.8
1,388,487	-		GFF4460	0.86	+0.9
1,389,058	+		GFF4461	0.59	-0.2
1,389,058	+		GFF4461	0.59	-0.0
1,389,317	-		GFF4461	0.89	-1.3
1,389,317	-		GFF4461	0.89	-0.0
1,389,361	+				-0.4