Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF40

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
39,905	-		GFF39	0.17	-0.6
40,084	+		GFF39	0.41	+1.7
40,318	+		GFF39	0.71	-0.8
40,319	-		GFF39	0.71	-0.3
40,319	-		GFF39	0.71	-2.1
40,932	+		GFF40	0.58	-0.8
40,959	+		GFF40	0.62	+0.8
40,960	-		GFF40	0.62	+2.1
41,034	+		GFF40	0.74	+2.7
41,034	+		GFF40	0.74	-0.6
41,281	-				+0.2
41,281	-				-0.1
41,296	-				+1.6
41,701	-		GFF41	0.36	-1.0
41,937	+		GFF41	0.63	+0.0
41,938	-		GFF41	0.63	-0.5