Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3642

Experiment: Ying_all64 rep C; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep C; time point 3
525,036	-		GFF3640	0.80	-0.7
526,187	-		GFF3642	0.36	-1.4
526,876	+		GFF3642	0.90	+1.3
526,876	+		GFF3642	0.90	+0.5
526,876	+		GFF3642	0.90	+0.1
526,876	+		GFF3642	0.90	-0.5
526,877	-		GFF3642	0.90	-1.8
526,877	-		GFF3642	0.90	-0.3
526,877	-		GFF3642	0.90	+0.3
527,000	-				-0.1
527,000	-				-0.3
527,120	-		GFF3643	0.11	+0.8
527,444	-		GFF3643	0.39	-0.4
527,546	-		GFF3643	0.48	-0.0